Index _ | A | B | C | D | E | F | G | I | K | L | M | N | O | P | Q | R | S | T | U | V | W | Z _ __call__() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) (in module PCAfold.utilities.QoIAwareProjectionPOUnet) A analysis module analyze_centers_change() (in module PCAfold.reduction) analyze_eigenvalue_distribution() (in module PCAfold.reduction) analyze_eigenvector_weights_change() (in module PCAfold.reduction) ANN (class in PCAfold.reconstruction) average_knn_distance() (in module PCAfold.preprocess.DensityEstimation) B build_training_graph() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) (in module PCAfold.utilities.QoIAwareProjectionPOUnet) C calculate_r2() (in module PCAfold.reduction.PCA) center_scale() (in module PCAfold.preprocess) coefficient_of_determination() (in module PCAfold.reconstruction) compute_bandwidth_anisotropic() (in module PCAfold.kernel_regression.KReg) compute_bandwidth_isotropic() (in module PCAfold.kernel_regression.KReg) compute_constant_bandwidth() (in module PCAfold.kernel_regression.KReg) compute_nearest_neighbors_bandwidth_anisotropic() (in module PCAfold.kernel_regression.KReg) compute_nearest_neighbors_bandwidth_isotropic() (in module PCAfold.kernel_regression.KReg) compute_normalized_range() (in module PCAfold.analysis) compute_normalized_variance() (in module PCAfold.analysis) ConditionalStatistics (class in PCAfold.preprocess) cost_function_normalized_variance_derivative() (in module PCAfold.analysis) D data_consistency_check() (in module PCAfold.reduction.PCA) DataSampler (class in PCAfold.preprocess) degrade_clusters() (in module PCAfold.preprocess) DensityEstimation (class in PCAfold.preprocess) derivatives() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) E EquilibratedSamplePCA() (in module PCAfold.reduction) F feature_size_map() (in module PCAfold.analysis) feature_size_map_smooth() (in module PCAfold.analysis) find_local_maxima() (in module PCAfold.analysis) flip_clusters() (in module PCAfold.preprocess) G generate_tex_table() (in module PCAfold.reconstruction) get_average_centroid_distance() (in module PCAfold.preprocess) get_centroids() (in module PCAfold.preprocess) get_partition() (in module PCAfold.preprocess) get_populations() (in module PCAfold.preprocess) get_weights_dictionary() (in module PCAfold.reduction.PCA) good_direction_estimate() (in module PCAfold.reconstruction) good_estimate() (in module PCAfold.reconstruction) I init_uniform_partitions() (in module PCAfold.reconstruction) invert_center_scale() (in module PCAfold.preprocess) invert_zero_pivot_transform() (in module PCAfold.preprocess) K KernelDensity (class in PCAfold.preprocess) KReg (class in PCAfold.kernel_regression) kth_nearest_neighbor_codensity() (in module PCAfold.preprocess.DensityEstimation) kth_nearest_neighbor_density() (in module PCAfold.preprocess.DensityEstimation) L load_data_from_file() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) (in module PCAfold.utilities.QoIAwareProjectionPOUnet) load_data_from_txt() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) load_from_file() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) (in module PCAfold.utilities.QoIAwareProjectionPOUnet) local_correlation() (in module PCAfold.reduction.LPCA) log_transform() (in module PCAfold.preprocess) LPCA (class in PCAfold.reduction) lstsq() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) M manifold_informed_backward_variable_elimination() (in module PCAfold.utilities) manifold_informed_forward_variable_addition() (in module PCAfold.utilities) manual() (in module PCAfold.preprocess.DataSampler) max_absolute_error() (in module PCAfold.reconstruction) mean_absolute_error() (in module PCAfold.reconstruction) mean_squared_error() (in module PCAfold.reconstruction) mean_squared_logarithmic_error() (in module PCAfold.reconstruction) mixture_fraction_bins() (in module PCAfold.preprocess) module analysis preprocess reconstruction reduction utilities N normalized_root_mean_squared_error() (in module PCAfold.reconstruction) normalized_variance_derivative() (in module PCAfold.analysis) number() (in module PCAfold.preprocess.DataSampler) O order_variables() (in module PCAfold.preprocess) outlier_detection() (in module PCAfold.preprocess) P partition_prenorm() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) PartitionOfUnityNetwork (class in PCAfold.reconstruction) PCA (class in PCAfold.reduction) percentage() (in module PCAfold.preprocess.DataSampler) plot_2d_clustering() (in module PCAfold.preprocess) plot_2d_manifold() (in module PCAfold.reduction) plot_2d_manifold_sequence() (in module PCAfold.reduction) plot_2d_regression() (in module PCAfold.reconstruction) plot_2d_regression_scalar_field() (in module PCAfold.reconstruction) plot_2d_regression_streamplot() (in module PCAfold.reconstruction) plot_2d_train_test_samples() (in module PCAfold.preprocess) plot_3d_clustering() (in module PCAfold.preprocess) plot_3d_manifold() (in module PCAfold.reduction) plot_3d_regression() (in module PCAfold.reconstruction) plot_conditional_statistics() (in module PCAfold.preprocess) plot_cumulative_variance() (in module PCAfold.reduction) plot_eigenvalue_distribution() (in module PCAfold.reduction) plot_eigenvalue_distribution_comparison() (in module PCAfold.reduction) plot_eigenvectors() (in module PCAfold.reduction) plot_eigenvectors_comparison() (in module PCAfold.reduction) plot_heatmap() (in module PCAfold.reduction) plot_heatmap_sequence() (in module PCAfold.reduction) plot_losses() (in module PCAfold.reconstruction.ANN) (in module PCAfold.utilities.QoIAwareProjection) plot_mode() (in module PCAfold.reduction) plot_normalized_variance() (in module PCAfold.analysis) plot_normalized_variance_comparison() (in module PCAfold.analysis) plot_normalized_variance_derivative() (in module PCAfold.analysis) plot_normalized_variance_derivative_comparison() (in module PCAfold.analysis) plot_parity() (in module PCAfold.reduction) plot_stratified_metric() (in module PCAfold.reconstruction) power_transform() (in module PCAfold.preprocess) predefined_variable_bins() (in module PCAfold.preprocess) predict() (in module PCAfold.kernel_regression.KReg) (in module PCAfold.reconstruction.ANN) preprocess module PreProcessing (class in PCAfold.preprocess) principal_variables() (in module PCAfold.reduction.PCA) print_metrics() (in module PCAfold.reconstruction.RegressionAssessment) print_stratified_metrics() (in module PCAfold.reconstruction.RegressionAssessment) print_weights_and_biases_init() (in module PCAfold.reconstruction.ANN) (in module PCAfold.utilities.QoIAwareProjection) print_weights_and_biases_trained() (in module PCAfold.reconstruction.ANN) (in module PCAfold.utilities.QoIAwareProjection) projection() (in module PCAfold.utilities.QoIAwareProjectionPOUnet) Q QoIAwareProjection (class in PCAfold.utilities) QoIAwareProjectionPOUnet (class in PCAfold.utilities) R r2_convergence() (in module PCAfold.reduction.PCA) random() (in module PCAfold.preprocess.DataSampler) random_sampling_normalized_variance() (in module PCAfold.analysis) reconstruct() (in module PCAfold.reduction.PCA) reconstruction module reduction module RegressionAssessment (class in PCAfold.reconstruction) remove_constant_vars() (in module PCAfold.preprocess) representative_sample_size() (in module PCAfold.preprocess) root_mean_squared_error() (in module PCAfold.reconstruction) S SamplePCA() (in module PCAfold.reduction) save_to_txt() (in module PCAfold.reduction.PCA) set_retained_eigenvalues() (in module PCAfold.reduction.PCA) stratified_coefficient_of_determination() (in module PCAfold.reconstruction) stratified_max_absolute_error() (in module PCAfold.reconstruction) stratified_mean_absolute_error() (in module PCAfold.reconstruction) stratified_mean_squared_error() (in module PCAfold.reconstruction) stratified_mean_squared_logarithmic_error() (in module PCAfold.reconstruction) stratified_normalized_root_mean_squared_error() (in module PCAfold.reconstruction) stratified_root_mean_squared_error() (in module PCAfold.reconstruction) SubsetPCA (class in PCAfold.reduction) summary() (in module PCAfold.reconstruction.ANN) (in module PCAfold.utilities.QoIAwareProjection) T tf_projection() (in module PCAfold.utilities.QoIAwareProjectionPOUnet) train() (in module PCAfold.reconstruction.ANN) (in module PCAfold.reconstruction.PartitionOfUnityNetwork) (in module PCAfold.utilities.QoIAwareProjection) (in module PCAfold.utilities.QoIAwareProjectionPOUnet) transform() (in module PCAfold.reduction.PCA) turning_points() (in module PCAfold.reconstruction) U u_scores() (in module PCAfold.reduction.PCA) update_l2reg() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) (in module PCAfold.utilities.QoIAwareProjectionPOUnet) update_lr() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) (in module PCAfold.utilities.QoIAwareProjectionPOUnet) utilities module V variable_bins() (in module PCAfold.preprocess) VarianceData (class in PCAfold.analysis) VQPCA (class in PCAfold.reduction) W w_scores() (in module PCAfold.reduction.PCA) write_data_to_file() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) (in module PCAfold.utilities.QoIAwareProjectionPOUnet) write_data_to_txt() (in module PCAfold.reconstruction.PartitionOfUnityNetwork) Z zero_neighborhood_bins() (in module PCAfold.preprocess) zero_pivot_transform() (in module PCAfold.preprocess)